Check for autocorrelation in residuals

This function is deprecated, use dsm_cor.

Usage

dsm.cor(
  dsm.obj,
  Transect.Label = "Transect.Label",
  Segment.Label = "Segment.Label",
  max.lag = 10,
  resid.type = "scaled.pearson",
  fun = cor,
  ylim = c(0, 1),
  subset = "all",
  ...
)

Arguments

dsm.obj: a fitted dsm object.
Transect.Label: label for the transect (default: Transect.Label). Using different labels can be useful when transects are split over geographical features or when transects are surveyed multiple times.
Segment.Label: label for the segments (default: Segment.Label).The result of calling order must make sense.
max.lag: maximum lag to calculate at.
resid.type: the type of residuals used, see residuals.gam. Defaults to "scaled.pearson" in the GAM case and "normalized" in the GAMM case (which are equivalent).
fun: the function to use, by default cor, must take two column vectors as arguments.
ylim: user defined limits in y direction.
subset: which subset of the data should the correlation function be calculated on?
...: other options to pass to plot.